Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh11P55288 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cdh11P55288 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdh11P55288 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.58□□□□□ -0.55
Cdh11P55288 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cdh11P55288 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Cdh11P55288 Gm13612-201ENSMUST00000119276 390 ntBASIC11.58□□□□□ -0.56
Cdh11P55288 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.58□□□□□ -0.56
Cdh11P55288 Mir1982-201ENSMUST00000157368 74 ntBASIC11.58□□□□□ -0.56
Cdh11P55288 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Cdh11P55288 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 Gm18473-201ENSMUST00000220543 868 ntBASIC11.58□□□□□ -0.56
Cdh11P55288 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Cdh11P55288 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cdh11P55288 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh11P55288 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Cdh11P55288 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh11P55288 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh11P55288 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh11P55288 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdh11P55288 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh11P55288 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdh11P55288 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.57□□□□□ -0.56
Cdh11P55288 AY702102-202ENSMUST00000194651 1173 ntBASIC11.57□□□□□ -0.56
Cdh11P55288 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.57□□□□□ -0.56
Cdh11P55288 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.57□□□□□ -0.56
Cdh11P55288 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdh11P55288 Gm6091-201ENSMUST00000098307 165 ntBASIC11.57□□□□□ -0.56
Cdh11P55288 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh11P55288 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdh11P55288 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh11P55288 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.57□□□□□ -0.56
Cdh11P55288 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.57□□□□□ -0.56
Cdh11P55288 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.57□□□□□ -0.56
Cdh11P55288 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdh11P55288 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh11P55288 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms