Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Rfx3P48381 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfx3P48381 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rfx3P48381 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.47□□□□□ -0.57
Rfx3P48381 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rfx3P48381 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rfx3P48381 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rfx3P48381 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Gm11918-201ENSMUST00000121660 179 ntBASIC11.47□□□□□ -0.57
Rfx3P48381 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.47□□□□□ -0.57
Rfx3P48381 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.47□□□□□ -0.57
Rfx3P48381 Gm8463-201ENSMUST00000208573 613 ntBASIC11.47□□□□□ -0.57
Rfx3P48381 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.47□□□□□ -0.57
Rfx3P48381 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Gm6180-201ENSMUST00000065243 498 ntBASIC11.47□□□□□ -0.57
Rfx3P48381 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rfx3P48381 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Rfx3P48381 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.47□□□□□ -0.57
Rfx3P48381 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfx3P48381 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rfx3P48381 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.46□□□□□ -0.57
Rfx3P48381 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.46□□□□□ -0.57
Rfx3P48381 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rfx3P48381 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rfx3P48381 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rfx3P48381 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Gm12490-201ENSMUST00000120255 560 ntBASIC11.46□□□□□ -0.57
Rfx3P48381 Gm11978-201ENSMUST00000122315 466 ntBASIC11.46□□□□□ -0.57
Rfx3P48381 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.46□□□□□ -0.57
Rfx3P48381 Gm44124-201ENSMUST00000204159 472 ntBASIC11.46□□□□□ -0.57
Rfx3P48381 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.46□□□□□ -0.57
Rfx3P48381 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.46□□□□□ -0.57
Rfx3P48381 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.46□□□□□ -0.57
Rfx3P48381 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfx3P48381 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.46□□□□□ -0.58
Rfx3P48381 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.46□□□□□ -0.58
Rfx3P48381 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfx3P48381 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfx3P48381 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfx3P48381 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfx3P48381 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rfx3P48381 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rfx3P48381 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rfx3P48381 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rfx3P48381 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.45□□□□□ -0.58
Rfx3P48381 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.45□□□□□ -0.58
Rfx3P48381 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.45□□□□□ -0.58
Rfx3P48381 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.45□□□□□ -0.58
Rfx3P48381 Gm6745-201ENSMUST00000199216 526 ntBASIC11.45□□□□□ -0.58
Rfx3P48381 Gm9908-201ENSMUST00000211534 448 ntBASIC11.45□□□□□ -0.58
Rfx3P48381 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.45□□□□□ -0.58
Rfx3P48381 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rfx3P48381 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms