Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.31□□□□□ -0.28
Rfx2P48379 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Rfx2P48379 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.31□□□□□ -0.28
Rfx2P48379 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx2P48379 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rfx2P48379 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.3□□□□□ -0.28
Rfx2P48379 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rfx2P48379 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.3□□□□□ -0.28
Rfx2P48379 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rfx2P48379 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rfx2P48379 Gm11222-201ENSMUST00000119005 738 ntBASIC13.3□□□□□ -0.28
Rfx2P48379 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.3□□□□□ -0.28
Rfx2P48379 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rfx2P48379 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rfx2P48379 Gm21769-201ENSMUST00000211922 111 ntBASIC13.3□□□□□ -0.28
Rfx2P48379 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Rfx2P48379 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.3□□□□□ -0.28
Rfx2P48379 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.3□□□□□ -0.28
Rfx2P48379 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.3□□□□□ -0.28
Rfx2P48379 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx2P48379 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rfx2P48379 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rfx2P48379 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Rfx2P48379 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx2P48379 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.29□□□□□ -0.28
Rfx2P48379 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Rfx2P48379 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rfx2P48379 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rfx2P48379 Gm8738-201ENSMUST00000172606 329 ntBASIC13.29□□□□□ -0.28
Rfx2P48379 Gm6621-201ENSMUST00000193251 772 ntBASIC13.29□□□□□ -0.28
Rfx2P48379 Gm19931-201ENSMUST00000198920 368 ntBASIC13.29□□□□□ -0.28
Rfx2P48379 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.29□□□□□ -0.28
Rfx2P48379 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.29□□□□□ -0.28
Rfx2P48379 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Rfx2P48379 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rfx2P48379 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Rfx2P48379 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx2P48379 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Rfx2P48379 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.28□□□□□ -0.28
Rfx2P48379 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.28□□□□□ -0.28
Rfx2P48379 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Gm26083-201ENSMUST00000157904 193 ntBASIC13.28□□□□□ -0.28
Rfx2P48379 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx2P48379 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.28□□□□□ -0.28
Rfx2P48379 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Rfx2P48379 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.28□□□□□ -0.28
Rfx2P48379 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.28□□□□□ -0.28
Rfx2P48379 Gm8099-201ENSMUST00000200510 742 ntBASIC13.28□□□□□ -0.28
Rfx2P48379 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.28□□□□□ -0.28
Rfx2P48379 Morn2-202ENSMUST00000227729 656 ntBASIC13.28□□□□□ -0.28
Rfx2P48379 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rfx2P48379 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms