Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.18□□□□□ -0.14
Nedd1P33215 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.18□□□□□ -0.14
Nedd1P33215 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nedd1P33215 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nedd1P33215 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Nedd1P33215 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.18□□□□□ -0.14
Nedd1P33215 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.18□□□□□ -0.14
Nedd1P33215 Gm26083-201ENSMUST00000157904 193 ntBASIC14.18□□□□□ -0.14
Nedd1P33215 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.18□□□□□ -0.14
Nedd1P33215 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.18□□□□□ -0.14
Nedd1P33215 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.18□□□□□ -0.14
Nedd1P33215 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nedd1P33215 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nedd1P33215 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd1P33215 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.17□□□□□ -0.14
Nedd1P33215 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.17□□□□□ -0.14
Nedd1P33215 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.17□□□□□ -0.14
Nedd1P33215 Gm4857-201ENSMUST00000192718 785 ntBASIC14.17□□□□□ -0.14
Nedd1P33215 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm13097-201ENSMUST00000210722 397 ntBASIC14.17□□□□□ -0.14
Nedd1P33215 Gm6082-201ENSMUST00000215204 454 ntBASIC14.17□□□□□ -0.14
Nedd1P33215 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.17□□□□□ -0.14
Nedd1P33215 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.17□□□□□ -0.14
Nedd1P33215 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nedd1P33215 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Nedd1P33215 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd1P33215 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd1P33215 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd1P33215 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nedd1P33215 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd1P33215 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd1P33215 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.16□□□□□ -0.14
Nedd1P33215 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.16□□□□□ -0.14
Nedd1P33215 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Nedd1P33215 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd1P33215 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd1P33215 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nedd1P33215 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nedd1P33215 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nedd1P33215 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nedd1P33215 Gm14109-201ENSMUST00000118814 309 ntBASIC14.16□□□□□ -0.14
Nedd1P33215 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd1P33215 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms