Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.88□□□□□ -0.19
Pde6bP23440 Mir7221-201ENSMUST00000184009 72 ntBASIC13.88□□□□□ -0.19
Pde6bP23440 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.88□□□□□ -0.19
Pde6bP23440 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.88□□□□□ -0.19
Pde6bP23440 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pde6bP23440 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.88□□□□□ -0.19
Pde6bP23440 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pde6bP23440 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Pde6bP23440 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.87□□□□□ -0.19
Pde6bP23440 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.87□□□□□ -0.19
Pde6bP23440 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.87□□□□□ -0.19
Pde6bP23440 Gm23363-201ENSMUST00000175024 79 ntBASIC13.87□□□□□ -0.19
Pde6bP23440 Gm19931-201ENSMUST00000198920 368 ntBASIC13.87□□□□□ -0.19
Pde6bP23440 Gm18753-201ENSMUST00000201000 566 ntBASIC13.87□□□□□ -0.19
Pde6bP23440 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.87□□□□□ -0.19
Pde6bP23440 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.87□□□□□ -0.19
Pde6bP23440 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.87□□□□□ -0.19
Pde6bP23440 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pde6bP23440 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.87□□□□□ -0.19
Pde6bP23440 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pde6bP23440 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Pde6bP23440 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pde6bP23440 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Gm11531-201ENSMUST00000117614 555 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.86□□□□□ -0.19
Pde6bP23440 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.86□□□□□ -0.19
Pde6bP23440 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.86□□□□□ -0.19
Pde6bP23440 Mir7070-201ENSMUST00000183657 86 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.86□□□□□ -0.19
Pde6bP23440 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.86□□□□□ -0.19
Pde6bP23440 Gm13097-201ENSMUST00000210722 397 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pde6bP23440 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.86□□□□□ -0.19
Pde6bP23440 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pde6bP23440 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pde6bP23440 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Pde6bP23440 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pde6bP23440 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms