Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Gm22323-201ENSMUST00000103832 109 ntBASIC13.05□□□□□ -0.32
Rb1P13405 Gm13297-201ENSMUST00000120205 934 ntBASIC13.05□□□□□ -0.32
Rb1P13405 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.05□□□□□ -0.32
Rb1P13405 Gm11637-201ENSMUST00000120601 592 ntBASIC13.05□□□□□ -0.32
Rb1P13405 Gm14381-201ENSMUST00000122105 414 ntBASIC13.05□□□□□ -0.32
Rb1P13405 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.05□□□□□ -0.32
Rb1P13405 Gm37259-201ENSMUST00000193903 849 ntBASIC13.05□□□□□ -0.32
Rb1P13405 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.05□□□□□ -0.32
Rb1P13405 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Gm8227-201ENSMUST00000223306 571 ntBASIC13.05□□□□□ -0.32
Rb1P13405 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rb1P13405 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Rb1P13405 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
Rb1P13405 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rb1P13405 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.04□□□□□ -0.32
Rb1P13405 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rb1P13405 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rb1P13405 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rb1P13405 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rb1P13405 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rb1P13405 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rb1P13405 Gm24255-201ENSMUST00000104481 128 ntBASIC13.04□□□□□ -0.32
Rb1P13405 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rb1P13405 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.04□□□□□ -0.32
Rb1P13405 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.04□□□□□ -0.32
Rb1P13405 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.04□□□□□ -0.32
Rb1P13405 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 Gm10608-202ENSMUST00000213924 676 ntBASIC13.04□□□□□ -0.32
Rb1P13405 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.04□□□□□ -0.32
Rb1P13405 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rb1P13405 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rb1P13405 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rb1P13405 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rb1P13405 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rb1P13405 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Rb1P13405 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Rb1P13405 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rb1P13405 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms