Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chmp6P0C0A3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chmp6P0C0A3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Gm11637-201ENSMUST00000120601 592 ntBASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Snora78-201ENSMUST00000158630 128 ntBASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp6P0C0A3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms