Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gm15276-201ENSMUST00000145953 498 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gm8018-201ENSMUST00000173536 789 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gm18827-201ENSMUST00000188341 790 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.94□□□□□ -0.34
Rc3h2P0C090 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rc3h2P0C090 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.93□□□□□ -0.34
Rc3h2P0C090 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.93□□□□□ -0.34
Rc3h2P0C090 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm27046-201ENSMUST00000182160 463 ntBASIC12.93□□□□□ -0.34
Rc3h2P0C090 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm3096-201ENSMUST00000185770 364 ntBASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm37201-201ENSMUST00000191845 523 ntBASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.93□□□□□ -0.34
Rc3h2P0C090 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.93□□□□□ -0.34
Rc3h2P0C090 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.93□□□□□ -0.34
Rc3h2P0C090 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rc3h2P0C090 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h2P0C090 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rc3h2P0C090 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.92□□□□□ -0.34
Rc3h2P0C090 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h2P0C090 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.92□□□□□ -0.34
Rc3h2P0C090 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h2P0C090 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rc3h2P0C090 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h2P0C090 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rc3h2P0C090 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms