Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ApoeP08226 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.01□□□□□ -0.49
ApoeP08226 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ApoeP08226 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Map1b-203ENSMUST00000223725 2669 ntBASIC12□□□□□ -0.49
ApoeP08226 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12□□□□□ -0.49
ApoeP08226 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ApoeP08226 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ApoeP08226 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Gm16342-201ENSMUST00000124025 1025 ntBASIC12□□□□□ -0.49
ApoeP08226 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12□□□□□ -0.49
ApoeP08226 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12□□□□□ -0.49
ApoeP08226 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
ApoeP08226 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ApoeP08226 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12□□□□□ -0.49
ApoeP08226 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ApoeP08226 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ApoeP08226 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.99□□□□□ -0.49
ApoeP08226 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Gm14701-201ENSMUST00000117156 348 ntBASIC11.99□□□□□ -0.49
ApoeP08226 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.99□□□□□ -0.49
ApoeP08226 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
ApoeP08226 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Gm27306-201ENSMUST00000183970 107 ntBASIC11.99□□□□□ -0.49
ApoeP08226 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.99□□□□□ -0.49
ApoeP08226 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.99□□□□□ -0.49
ApoeP08226 Gm2213-201ENSMUST00000197485 688 ntBASIC11.99□□□□□ -0.49
ApoeP08226 Gm43514-201ENSMUST00000198852 424 ntBASIC11.99□□□□□ -0.49
ApoeP08226 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.99□□□□□ -0.49
ApoeP08226 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.99□□□□□ -0.49
ApoeP08226 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.99□□□□□ -0.49
ApoeP08226 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.99□□□□□ -0.49
ApoeP08226 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ApoeP08226 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.99□□□□□ -0.49
ApoeP08226 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.99□□□□□ -0.49
ApoeP08226 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.99□□□□□ -0.49
ApoeP08226 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.99□□□□□ -0.49
ApoeP08226 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ApoeP08226 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.98□□□□□ -0.49
ApoeP08226 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.98□□□□□ -0.49
ApoeP08226 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms