Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Gm12241-201ENSMUST00000118330 726 ntBASIC11.31□□□□□ -0.6
P06344 Gm14921-201ENSMUST00000118643 908 ntBASIC11.31□□□□□ -0.6
P06344 Gm13492-201ENSMUST00000119772 665 ntBASIC11.31□□□□□ -0.6
P06344 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Gm38092-201ENSMUST00000195600 653 ntBASIC11.31□□□□□ -0.6
P06344 Gm43822-201ENSMUST00000200285 476 ntBASIC11.31□□□□□ -0.6
P06344 Gm3961-201ENSMUST00000204425 994 ntBASIC11.31□□□□□ -0.6
P06344 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.31□□□□□ -0.6
P06344 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Gm8227-201ENSMUST00000223306 571 ntBASIC11.31□□□□□ -0.6
P06344 Mir339-201ENSMUST00000083659 96 ntBASIC11.31□□□□□ -0.6
P06344 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.31□□□□□ -0.6
P06344 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
P06344 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.31□□□□□ -0.6
P06344 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.31□□□□□ -0.6
P06344 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P06344 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.31□□□□□ -0.6
P06344 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.31□□□□□ -0.6
P06344 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P06344 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.3□□□□□ -0.6
P06344 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
P06344 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P06344 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
P06344 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Gm15370-201ENSMUST00000117158 253 ntBASIC11.3□□□□□ -0.6
P06344 Gm4986-201ENSMUST00000119731 549 ntBASIC11.3□□□□□ -0.6
P06344 Gm13342-201ENSMUST00000121055 207 ntBASIC11.3□□□□□ -0.6
P06344 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Gm13316-201ENSMUST00000140537 691 ntBASIC11.3□□□□□ -0.6
P06344 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P06344 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.3□□□□□ -0.6
P06344 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.3□□□□□ -0.6
P06344 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.3□□□□□ -0.6
P06344 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.3□□□□□ -0.6
P06344 Gm6334-201ENSMUST00000207083 228 ntBASIC11.3□□□□□ -0.6
P06344 Gm5904-201ENSMUST00000210286 865 ntBASIC11.3□□□□□ -0.6
P06344 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.3□□□□□ -0.6
P06344 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.3□□□□□ -0.6
P06344 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.3□□□□□ -0.6
P06344 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.3□□□□□ -0.6
P06344 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.3□□□□□ -0.6
P06344 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P06344 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P06344 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms