Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chrna1P04756 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.6□□□□□ -0.23
Chrna1P04756 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.6□□□□□ -0.23
Chrna1P04756 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.6□□□□□ -0.23
Chrna1P04756 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.6□□□□□ -0.23
Chrna1P04756 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.6□□□□□ -0.23
Chrna1P04756 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.6□□□□□ -0.23
Chrna1P04756 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna1P04756 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.59□□□□□ -0.23
Chrna1P04756 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chrna1P04756 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Chrna1P04756 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Gm24231-201ENSMUST00000104315 133 ntBASIC13.59□□□□□ -0.23
Chrna1P04756 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Gm14208-201ENSMUST00000119645 678 ntBASIC13.59□□□□□ -0.23
Chrna1P04756 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.59□□□□□ -0.23
Chrna1P04756 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.59□□□□□ -0.23
Chrna1P04756 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.59□□□□□ -0.23
Chrna1P04756 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.59□□□□□ -0.23
Chrna1P04756 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chrna1P04756 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.59□□□□□ -0.23
Chrna1P04756 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.59□□□□□ -0.23
Chrna1P04756 Gm26461-201ENSMUST00000175064 290 ntBASIC13.59□□□□□ -0.23
Chrna1P04756 Mir3102-201ENSMUST00000175555 104 ntBASIC13.59□□□□□ -0.23
Chrna1P04756 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.59□□□□□ -0.23
Chrna1P04756 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Chrna1P04756 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chrna1P04756 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna1P04756 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chrna1P04756 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Chrna1P04756 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Chrna1P04756 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.58□□□□□ -0.23
Chrna1P04756 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chrna1P04756 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Chrna1P04756 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Chrna1P04756 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chrna1P04756 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.58□□□□□ -0.23
Chrna1P04756 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.58□□□□□ -0.24
Chrna1P04756 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.58□□□□□ -0.24
Chrna1P04756 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Gm12015-201ENSMUST00000117065 843 ntBASIC13.58□□□□□ -0.24
Chrna1P04756 Gm11439-201ENSMUST00000118598 409 ntBASIC13.58□□□□□ -0.24
Chrna1P04756 Gm6963-201ENSMUST00000147879 379 ntBASIC13.58□□□□□ -0.24
Chrna1P04756 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.58□□□□□ -0.24
Chrna1P04756 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.58□□□□□ -0.24
Chrna1P04756 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.58□□□□□ -0.24
Chrna1P04756 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.58□□□□□ -0.24
Chrna1P04756 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.58□□□□□ -0.24
Chrna1P04756 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Chrna1P04756 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.58□□□□□ -0.24
Chrna1P04756 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chrna1P04756 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chrna1P04756 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chrna1P04756 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Chrna1P04756 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chrna1P04756 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chrna1P04756 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chrna1P04756 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chrna1P04756 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms