Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC11.7□□□□□ -0.54
Alx3O70137 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.7□□□□□ -0.54
Alx3O70137 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Alx3O70137 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.7□□□□□ -0.54
Alx3O70137 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Alx3O70137 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.7□□□□□ -0.54
Alx3O70137 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Alx3O70137 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC11.69□□□□□ -0.54
Alx3O70137 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.69□□□□□ -0.54
Alx3O70137 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC11.69□□□□□ -0.54
Alx3O70137 Itm2b-204ENSMUST00000228637 783 ntBASIC11.69□□□□□ -0.54
Alx3O70137 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.69□□□□□ -0.54
Alx3O70137 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Alx3O70137 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Alx3O70137 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Alx3O70137 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.69□□□□□ -0.54
Alx3O70137 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC11.69□□□□□ -0.54
Alx3O70137 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Alx3O70137 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Alx3O70137 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.68□□□□□ -0.54
Alx3O70137 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.68□□□□□ -0.54
Alx3O70137 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Alx3O70137 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.68□□□□□ -0.54
Alx3O70137 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Alx3O70137 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Alx3O70137 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.68□□□□□ -0.54
Alx3O70137 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.68□□□□□ -0.54
Alx3O70137 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC11.68□□□□□ -0.54
Alx3O70137 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Alx3O70137 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms