Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Polr1aO35134 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Polr1aO35134 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Polr1aO35134 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 AC091458.1-201ENSMUST00000220902 1361 ntBASIC19.13■□□□□ 0.65
Polr1aO35134 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Gm15352-201ENSMUST00000118696 270 ntBASIC19.13■□□□□ 0.65
Polr1aO35134 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC19.13■□□□□ 0.65
Polr1aO35134 Snora73b-201ENSMUST00000083419 205 ntBASIC19.13■□□□□ 0.65
Polr1aO35134 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Polr1aO35134 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Polr1aO35134 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC19.13■□□□□ 0.65
Polr1aO35134 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr1aO35134 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Gm19863-201ENSMUST00000192480 2218 ntBASIC19.12■□□□□ 0.65
Polr1aO35134 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Gm12795-201ENSMUST00000117594 539 ntBASIC19.12■□□□□ 0.65
Polr1aO35134 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Polr1aO35134 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC19.12■□□□□ 0.65
Polr1aO35134 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC19.12■□□□□ 0.65
Polr1aO35134 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Polr1aO35134 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC19.12■□□□□ 0.65
Polr1aO35134 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC19.12■□□□□ 0.65
Polr1aO35134 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr1aO35134 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Polr1aO35134 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Gm4310-201ENSMUST00000177847 889 ntBASIC19.11■□□□□ 0.65
Polr1aO35134 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC19.11■□□□□ 0.65
Polr1aO35134 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Polr1aO35134 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC19.11■□□□□ 0.65
Polr1aO35134 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC19.11■□□□□ 0.65
Polr1aO35134 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC19.11■□□□□ 0.65
Polr1aO35134 Gm4726-201ENSMUST00000135604 736 ntBASIC19.11■□□□□ 0.65
Polr1aO35134 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC19.11■□□□□ 0.65
Polr1aO35134 Gm6019-201ENSMUST00000148369 736 ntBASIC19.11■□□□□ 0.65
Polr1aO35134 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC19.11■□□□□ 0.65
Polr1aO35134 Ighv5-11-201ENSMUST00000193354 371 ntBASIC19.11■□□□□ 0.65
Polr1aO35134 Gm37458-201ENSMUST00000194055 410 ntBASIC19.11■□□□□ 0.65
Polr1aO35134 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr1aO35134 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC19.11■□□□□ 0.65
Polr1aO35134 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Polr1aO35134 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Polr1aO35134 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 n-R5s64-201ENSMUST00000102019 119 ntBASIC19.1■□□□□ 0.65
Polr1aO35134 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Gm11451-201ENSMUST00000118946 630 ntBASIC19.1■□□□□ 0.65
Polr1aO35134 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC19.1■□□□□ 0.65
Polr1aO35134 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Gm23771-201ENSMUST00000178702 110 ntBASIC19.1■□□□□ 0.65
Polr1aO35134 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Gm5852-201ENSMUST00000194119 1021 ntBASIC19.1■□□□□ 0.65
Polr1aO35134 Gm5542-201ENSMUST00000195485 1089 ntBASIC19.1■□□□□ 0.65
Polr1aO35134 Gm43186-201ENSMUST00000198130 824 ntBASIC19.1■□□□□ 0.65
Polr1aO35134 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms