Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx1-1G3UXB3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm43059-201ENSMUST00000202437 1388 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm7648-201ENSMUST00000173036 1658 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm19353-201ENSMUST00000184561 445 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm44585-201ENSMUST00000207150 607 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Gm5715-201ENSMUST00000196854 1465 ntBASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx1-1G3UXB3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 AC159196.3-201ENSMUST00000224307 1841 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm24749-201ENSMUST00000157838 343 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm23773-201ENSMUST00000158985 296 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm8669-201ENSMUST00000183839 945 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm43805-201ENSMUST00000198488 824 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 AC160109.1-201ENSMUST00000225592 729 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Olfr1160-201ENSMUST00000099839 960 ntBASIC15.13■□□□□ 0.01
Nkx1-1G3UXB3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms