Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Colca2F8VPY8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.91□□□□□ -0.5
Colca2F8VPY8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gm12516-201ENSMUST00000120819 385 ntBASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gm15595-201ENSMUST00000120840 961 ntBASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gm25951-201ENSMUST00000175330 64 ntBASIC11.91□□□□□ -0.5
Colca2F8VPY8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.91□□□□□ -0.5
Colca2F8VPY8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Colca2F8VPY8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.91□□□□□ -0.5
Colca2F8VPY8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Colca2F8VPY8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.9□□□□□ -0.5
Colca2F8VPY8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm25880-201ENSMUST00000104331 132 ntBASIC11.9□□□□□ -0.5
Colca2F8VPY8 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm11956-201ENSMUST00000119525 512 ntBASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm12899-201ENSMUST00000120565 551 ntBASIC11.9□□□□□ -0.5
Colca2F8VPY8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Mir6998-201ENSMUST00000183343 64 ntBASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm27910-201ENSMUST00000185004 107 ntBASIC11.9□□□□□ -0.5
Colca2F8VPY8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.9□□□□□ -0.5
Colca2F8VPY8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Colca2F8VPY8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Colca2F8VPY8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Colca2F8VPY8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Colca2F8VPY8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Colca2F8VPY8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.9□□□□□ -0.51
Colca2F8VPY8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Colca2F8VPY8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Colca2F8VPY8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms