Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Gm13668-201ENSMUST00000119237 1001 ntBASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Gm4879-201ENSMUST00000122190 1272 ntBASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Gm18711-201ENSMUST00000199341 750 ntBASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 AC154176.1-201ENSMUST00000225897 220 ntBASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Gm15566-201ENSMUST00000121130 590 ntBASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hfm1D3Z4R1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Gm8815-201ENSMUST00000173809 620 ntBASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Gm42657-201ENSMUST00000201746 211 ntBASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Gm6867-201ENSMUST00000219165 425 ntBASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hfm1D3Z4R1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm13047-201ENSMUST00000117116 815 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm13916-201ENSMUST00000117368 628 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm15725-201ENSMUST00000119947 1090 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm13937-201ENSMUST00000121000 988 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm44158-201ENSMUST00000203881 505 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Gm19091-201ENSMUST00000208120 978 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 AC166341.2-201ENSMUST00000220571 120 ntBASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hfm1D3Z4R1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms