Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clip3B9EHT4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Gm19184-201ENSMUST00000196798 928 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.37□□□□□ -0.43
Clip3B9EHT4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clip3B9EHT4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Gm23931-201ENSMUST00000103842 109 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 Mir874-201ENSMUST00000104769 76 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Gm7029-201ENSMUST00000173226 450 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 Gm27514-201ENSMUST00000183692 110 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Gm9823-201ENSMUST00000051212 327 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 Olfr582-201ENSMUST00000098212 960 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.36□□□□□ -0.43
Clip3B9EHT4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clip3B9EHT4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms