Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm22189-201ENSMUST00000103822 86 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm10576-201ENSMUST00000191927 825 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm45841-201ENSMUST00000207700 164 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm2423-201ENSMUST00000074863 733 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Cog3-203ENSMUST00000227473 4197 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.09□□□□□ -0.63
Rd3lB2RV38 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Rd3lB2RV38 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rd3lB2RV38 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Rd3lB2RV38 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.08□□□□□ -0.64
Rd3lB2RV38 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.08□□□□□ -0.64
Rd3lB2RV38 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm13689-201ENSMUST00000119360 685 ntBASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.08□□□□□ -0.64
Rd3lB2RV38 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.08□□□□□ -0.64
Rd3lB2RV38 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rd3lB2RV38 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rd3lB2RV38 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.07□□□□□ -0.64
Rd3lB2RV38 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rd3lB2RV38 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rd3lB2RV38 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.07□□□□□ -0.64
Rd3lB2RV38 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Rd3lB2RV38 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Rd3lB2RV38 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rd3lB2RV38 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms