Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.22□□□□□ -0.29
Scn1aA2APX8 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.22□□□□□ -0.29
Scn1aA2APX8 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.22□□□□□ -0.29
Scn1aA2APX8 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.22□□□□□ -0.29
Scn1aA2APX8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.22□□□□□ -0.29
Scn1aA2APX8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.21□□□□□ -0.29
Scn1aA2APX8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Gm2383-201ENSMUST00000181461 807 ntBASIC13.21□□□□□ -0.29
Scn1aA2APX8 Gm18056-201ENSMUST00000207670 568 ntBASIC13.21□□□□□ -0.29
Scn1aA2APX8 Gm18061-201ENSMUST00000208350 562 ntBASIC13.21□□□□□ -0.29
Scn1aA2APX8 Gm18063-201ENSMUST00000208529 568 ntBASIC13.21□□□□□ -0.29
Scn1aA2APX8 Gm18052-201ENSMUST00000208750 559 ntBASIC13.21□□□□□ -0.29
Scn1aA2APX8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.21□□□□□ -0.29
Scn1aA2APX8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.21□□□□□ -0.29
Scn1aA2APX8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1aA2APX8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Scn1aA2APX8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn1aA2APX8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn1aA2APX8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Scn1aA2APX8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Scn1aA2APX8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Rprl1-202ENSMUST00000198476 238 ntBASIC13.2□□□□□ -0.3
Scn1aA2APX8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.2□□□□□ -0.3
Scn1aA2APX8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.2□□□□□ -0.3
Scn1aA2APX8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Gm11439-201ENSMUST00000118598 409 ntBASIC13.2□□□□□ -0.3
Scn1aA2APX8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.2□□□□□ -0.3
Scn1aA2APX8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn1aA2APX8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1aA2APX8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scn1aA2APX8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms