Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Gm8805-201ENSMUST00000117848 313 ntBASIC10.39□□□□□ -0.75
Trav18A0A075B656 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Auts2-212ENSMUST00000178555 309 ntBASIC10.39□□□□□ -0.75
Trav18A0A075B656 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.39□□□□□ -0.75
Trav18A0A075B656 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.39□□□□□ -0.75
Trav18A0A075B656 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.39□□□□□ -0.75
Trav18A0A075B656 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav18A0A075B656 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm13612-201ENSMUST00000119276 390 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Proscos-202ENSMUST00000178990 666 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm27701-201ENSMUST00000184498 110 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm28911-201ENSMUST00000188837 117 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm26035-201ENSMUST00000083065 308 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav18A0A075B656 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.38□□□□□ -0.75
Trav18A0A075B656 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.37□□□□□ -0.75
Trav18A0A075B656 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms