Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt88Q9CPR6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Krt88Q9CPR6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Krt88Q9CPR6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt88Q9CPR6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt88Q9CPR6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Krt88Q9CPR6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.9■□□□□ 0.62
Krt88Q9CPR6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Krt88Q9CPR6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Krt88Q9CPR6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt88Q9CPR6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt88Q9CPR6 Gm44428-201ENSMUST00000204474 874 ntBASIC18.89■□□□□ 0.61
Krt88Q9CPR6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt88Q9CPR6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt88Q9CPR6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt88Q9CPR6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt88Q9CPR6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt88Q9CPR6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Krt88Q9CPR6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.88■□□□□ 0.61
Krt88Q9CPR6 Gm7432-201ENSMUST00000210343 879 ntBASIC18.88■□□□□ 0.61
Krt88Q9CPR6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.88■□□□□ 0.61
Krt88Q9CPR6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krt88Q9CPR6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krt88Q9CPR6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krt88Q9CPR6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Krt88Q9CPR6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krt88Q9CPR6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Krt88Q9CPR6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Krt88Q9CPR6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Krt88Q9CPR6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.86■□□□□ 0.61
Krt88Q9CPR6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Krt88Q9CPR6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt88Q9CPR6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt88Q9CPR6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.85■□□□□ 0.61
Krt88Q9CPR6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Krt88Q9CPR6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Krt88Q9CPR6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt88Q9CPR6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt88Q9CPR6 Gm11599-201ENSMUST00000118720 878 ntBASIC18.84■□□□□ 0.61
Krt88Q9CPR6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.84■□□□□ 0.61
Krt88Q9CPR6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.84■□□□□ 0.61
Krt88Q9CPR6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt88Q9CPR6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt88Q9CPR6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Krt88Q9CPR6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Krt88Q9CPR6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.83■□□□□ 0.61
Krt88Q9CPR6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krt88Q9CPR6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krt88Q9CPR6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krt88Q9CPR6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krt88Q9CPR6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt88Q9CPR6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt88Q9CPR6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt88Q9CPR6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt88Q9CPR6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Krt88Q9CPR6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Krt88Q9CPR6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Krt88Q9CPR6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt88Q9CPR6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.81■□□□□ 0.6
Krt88Q9CPR6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt88Q9CPR6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt88Q9CPR6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Krt88Q9CPR6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Krt88Q9CPR6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt88Q9CPR6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.8■□□□□ 0.6
Krt88Q9CPR6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt88Q9CPR6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt88Q9CPR6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt88Q9CPR6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt88Q9CPR6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.79■□□□□ 0.6
Krt88Q9CPR6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt88Q9CPR6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Krt88Q9CPR6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt88Q9CPR6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt88Q9CPR6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt88Q9CPR6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms