Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Pcdh15Q99PJ1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.67■■□□□ 1.54
Pcdh15Q99PJ1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh15Q99PJ1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC24.67■■□□□ 1.54
Pcdh15Q99PJ1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.67■■□□□ 1.54
Pcdh15Q99PJ1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.66■■□□□ 1.54
Pcdh15Q99PJ1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh15Q99PJ1 Gm9870-201ENSMUST00000063874 645 ntBASIC24.66■■□□□ 1.54
Pcdh15Q99PJ1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdh15Q99PJ1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdh15Q99PJ1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdh15Q99PJ1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.64■■□□□ 1.54
Pcdh15Q99PJ1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdh15Q99PJ1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdh15Q99PJ1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdh15Q99PJ1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh15Q99PJ1 Gm27011-201ENSMUST00000182352 972 ntBASIC24.63■■□□□ 1.53
Pcdh15Q99PJ1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
Pcdh15Q99PJ1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh15Q99PJ1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh15Q99PJ1 Gm10849-201ENSMUST00000100397 618 ntBASIC24.62■■□□□ 1.53
Pcdh15Q99PJ1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcdh15Q99PJ1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC24.62■■□□□ 1.53
Pcdh15Q99PJ1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.62■■□□□ 1.53
Pcdh15Q99PJ1 Gm8493-201ENSMUST00000196881 489 ntBASIC24.62■■□□□ 1.53
Pcdh15Q99PJ1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Pcdh15Q99PJ1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh15Q99PJ1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdh15Q99PJ1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdh15Q99PJ1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.61■■□□□ 1.53
Pcdh15Q99PJ1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdh15Q99PJ1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdh15Q99PJ1 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.61■■□□□ 1.53
Pcdh15Q99PJ1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdh15Q99PJ1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.59■■□□□ 1.53
Pcdh15Q99PJ1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Pcdh15Q99PJ1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh15Q99PJ1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcdh15Q99PJ1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.59■■□□□ 1.53
Pcdh15Q99PJ1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.59■■□□□ 1.53
Pcdh15Q99PJ1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh15Q99PJ1 Gm10493-201ENSMUST00000097270 612 ntBASIC24.59■■□□□ 1.53
Pcdh15Q99PJ1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.58■■□□□ 1.53
Pcdh15Q99PJ1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdh15Q99PJ1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdh15Q99PJ1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 Gm37179-201ENSMUST00000194862 823 ntBASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 Gm27405-201ENSMUST00000184201 112 ntBASIC24.57■■□□□ 1.52
Pcdh15Q99PJ1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Pcdh15Q99PJ1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.56■■□□□ 1.52
Pcdh15Q99PJ1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdh15Q99PJ1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Pcdh15Q99PJ1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Pcdh15Q99PJ1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Pcdh15Q99PJ1 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.54■■□□□ 1.52
Pcdh15Q99PJ1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.54■■□□□ 1.52
Pcdh15Q99PJ1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdh15Q99PJ1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdh15Q99PJ1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdh15Q99PJ1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdh15Q99PJ1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC24.52■■□□□ 1.52
Pcdh15Q99PJ1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdh15Q99PJ1 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.51■■□□□ 1.51
Pcdh15Q99PJ1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh15Q99PJ1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh15Q99PJ1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh15Q99PJ1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh15Q99PJ1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdh15Q99PJ1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms