Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga4Q91XY4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdhga4Q91XY4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga4Q91XY4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdhga4Q91XY4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga4Q91XY4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga4Q91XY4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga4Q91XY4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Rps24-207ENSMUST00000224568 714 ntBASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga4Q91XY4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhga4Q91XY4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga4Q91XY4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga4Q91XY4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdhga4Q91XY4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhga4Q91XY4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga4Q91XY4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga4Q91XY4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhga4Q91XY4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga4Q91XY4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga4Q91XY4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga4Q91XY4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga4Q91XY4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhga4Q91XY4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.46■□□□□ 0.87
Pcdhga4Q91XY4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga4Q91XY4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga4Q91XY4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhga4Q91XY4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Pcdhga4Q91XY4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pcdhga4Q91XY4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga4Q91XY4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhga4Q91XY4 Gm45102-201ENSMUST00000207427 857 ntBASIC20.45■□□□□ 0.86
Pcdhga4Q91XY4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga4Q91XY4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhga4Q91XY4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhga4Q91XY4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga4Q91XY4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga4Q91XY4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms