Protein–RNA interactions for Protein: Q8BVU0

Lrch3, Leucine-rich repeat and calponin homology domain-containing protein 3, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch3Q8BVU0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lrch3Q8BVU0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Lrch3Q8BVU0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.3■■□□□ 1.32
Lrch3Q8BVU0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Lrch3Q8BVU0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Lrch3Q8BVU0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lrch3Q8BVU0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Lrch3Q8BVU0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.29■■□□□ 1.32
Lrch3Q8BVU0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.29■■□□□ 1.32
Lrch3Q8BVU0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.29■■□□□ 1.32
Lrch3Q8BVU0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.29■■□□□ 1.32
Lrch3Q8BVU0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lrch3Q8BVU0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.29■■□□□ 1.32
Lrch3Q8BVU0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Lrch3Q8BVU0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrch3Q8BVU0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.28■■□□□ 1.32
Lrch3Q8BVU0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrch3Q8BVU0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lrch3Q8BVU0 Gm12251-201ENSMUST00000117893 792 ntBASIC23.27■■□□□ 1.32
Lrch3Q8BVU0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.27■■□□□ 1.32
Lrch3Q8BVU0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.27■■□□□ 1.32
Lrch3Q8BVU0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lrch3Q8BVU0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Lrch3Q8BVU0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Lrch3Q8BVU0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.25■■□□□ 1.31
Lrch3Q8BVU0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrch3Q8BVU0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.25■■□□□ 1.31
Lrch3Q8BVU0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.25■■□□□ 1.31
Lrch3Q8BVU0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrch3Q8BVU0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lrch3Q8BVU0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrch3Q8BVU0 Gm43060-201ENSMUST00000200621 289 ntBASIC23.24■■□□□ 1.31
Lrch3Q8BVU0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lrch3Q8BVU0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Lrch3Q8BVU0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.23■■□□□ 1.31
Lrch3Q8BVU0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.23■■□□□ 1.31
Lrch3Q8BVU0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.23■■□□□ 1.31
Lrch3Q8BVU0 Gm9870-201ENSMUST00000063874 645 ntBASIC23.23■■□□□ 1.31
Lrch3Q8BVU0 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.23■■□□□ 1.31
Lrch3Q8BVU0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
Lrch3Q8BVU0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lrch3Q8BVU0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.22■■□□□ 1.31
Lrch3Q8BVU0 Gm26833-201ENSMUST00000180899 440 ntBASIC23.22■■□□□ 1.31
Lrch3Q8BVU0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lrch3Q8BVU0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lrch3Q8BVU0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Lrch3Q8BVU0 Gm10602-201ENSMUST00000098239 609 ntBASIC23.21■■□□□ 1.31
Lrch3Q8BVU0 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.21■■□□□ 1.31
Lrch3Q8BVU0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lrch3Q8BVU0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lrch3Q8BVU0 Nespas-201ENSMUST00000143738 1083 ntBASIC23.2■■□□□ 1.3
Lrch3Q8BVU0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.2■■□□□ 1.3
Lrch3Q8BVU0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
Lrch3Q8BVU0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.2■■□□□ 1.3
Lrch3Q8BVU0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.2■■□□□ 1.3
Lrch3Q8BVU0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lrch3Q8BVU0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lrch3Q8BVU0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.19■■□□□ 1.3
Lrch3Q8BVU0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lrch3Q8BVU0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Lrch3Q8BVU0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Lrch3Q8BVU0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Lrch3Q8BVU0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lrch3Q8BVU0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.18■■□□□ 1.3
Lrch3Q8BVU0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Lrch3Q8BVU0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lrch3Q8BVU0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.18■■□□□ 1.3
Lrch3Q8BVU0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lrch3Q8BVU0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lrch3Q8BVU0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Lrch3Q8BVU0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Lrch3Q8BVU0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.17■■□□□ 1.3
Lrch3Q8BVU0 Gm18671-201ENSMUST00000214826 683 ntBASIC23.17■■□□□ 1.3
Lrch3Q8BVU0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lrch3Q8BVU0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.17■■□□□ 1.3
Lrch3Q8BVU0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Gm10252-201ENSMUST00000209541 832 ntBASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lrch3Q8BVU0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.15■■□□□ 1.3
Lrch3Q8BVU0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lrch3Q8BVU0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Lrch3Q8BVU0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lrch3Q8BVU0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Lrch3Q8BVU0 AV356131-201ENSMUST00000206201 750 ntBASIC23.15■■□□□ 1.3
Lrch3Q8BVU0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.15■■□□□ 1.3
Lrch3Q8BVU0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lrch3Q8BVU0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
Lrch3Q8BVU0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Lrch3Q8BVU0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Lrch3Q8BVU0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Lrch3Q8BVU0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Lrch3Q8BVU0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Lrch3Q8BVU0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms