Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ckap4Q8BMK4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Ckap4Q8BMK4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap4Q8BMK4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.78■□□□□ 0.76
Ckap4Q8BMK4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.78■□□□□ 0.76
Ckap4Q8BMK4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap4Q8BMK4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ckap4Q8BMK4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ckap4Q8BMK4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ckap4Q8BMK4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.75■□□□□ 0.75
Ckap4Q8BMK4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap4Q8BMK4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.75■□□□□ 0.75
Ckap4Q8BMK4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.75■□□□□ 0.75
Ckap4Q8BMK4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap4Q8BMK4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap4Q8BMK4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap4Q8BMK4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ckap4Q8BMK4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap4Q8BMK4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap4Q8BMK4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap4Q8BMK4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap4Q8BMK4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap4Q8BMK4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ckap4Q8BMK4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap4Q8BMK4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap4Q8BMK4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap4Q8BMK4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap4Q8BMK4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.71■□□□□ 0.75
Ckap4Q8BMK4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap4Q8BMK4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap4Q8BMK4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap4Q8BMK4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.7■□□□□ 0.74
Ckap4Q8BMK4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap4Q8BMK4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ckap4Q8BMK4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Ckap4Q8BMK4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Gm10420-201ENSMUST00000121713 882 ntBASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ckap4Q8BMK4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap4Q8BMK4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap4Q8BMK4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.68■□□□□ 0.74
Ckap4Q8BMK4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap4Q8BMK4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ckap4Q8BMK4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms