Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc28Q80XJ3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Gm43173-201ENSMUST00000202246 593 ntBASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.97■□□□□ 0.47
Ttc28Q80XJ3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.96■□□□□ 0.47
Ttc28Q80XJ3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Gm10849-201ENSMUST00000100397 618 ntBASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Gm43017-201ENSMUST00000198296 752 ntBASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc28Q80XJ3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 Gm26571-201ENSMUST00000181399 666 ntBASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ttc28Q80XJ3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ttc28Q80XJ3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ttc28Q80XJ3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.93■□□□□ 0.46
Ttc28Q80XJ3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ttc28Q80XJ3 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.93■□□□□ 0.46
Ttc28Q80XJ3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.93■□□□□ 0.46
Ttc28Q80XJ3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ttc28Q80XJ3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ttc28Q80XJ3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.92■□□□□ 0.46
Ttc28Q80XJ3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ttc28Q80XJ3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ttc28Q80XJ3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ttc28Q80XJ3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ttc28Q80XJ3 Gm8493-201ENSMUST00000196881 489 ntBASIC17.92■□□□□ 0.46
Ttc28Q80XJ3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ttc28Q80XJ3 Gm12251-201ENSMUST00000117893 792 ntBASIC17.91■□□□□ 0.46
Ttc28Q80XJ3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.91■□□□□ 0.46
Ttc28Q80XJ3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ttc28Q80XJ3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Gm9870-201ENSMUST00000063874 645 ntBASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ttc28Q80XJ3 Gm27405-201ENSMUST00000184201 112 ntBASIC17.89■□□□□ 0.45
Ttc28Q80XJ3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ttc28Q80XJ3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ttc28Q80XJ3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ttc28Q80XJ3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ttc28Q80XJ3 Gm7291-201ENSMUST00000199147 382 ntBASIC17.89■□□□□ 0.45
Ttc28Q80XJ3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.88■□□□□ 0.45
Ttc28Q80XJ3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms