Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx1P63006 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lhx1P63006 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx1P63006 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx1P63006 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx1P63006 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Lhx1P63006 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx1P63006 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.75■□□□□ 0.91
Lhx1P63006 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx1P63006 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.74■□□□□ 0.91
Lhx1P63006 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx1P63006 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx1P63006 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx1P63006 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lhx1P63006 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lhx1P63006 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Lhx1P63006 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx1P63006 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx1P63006 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx1P63006 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx1P63006 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.73■□□□□ 0.91
Lhx1P63006 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.73■□□□□ 0.91
Lhx1P63006 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lhx1P63006 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx1P63006 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx1P63006 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx1P63006 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
Lhx1P63006 Gm22238-201ENSMUST00000175222 88 ntBASIC20.72■□□□□ 0.91
Lhx1P63006 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx1P63006 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Lhx1P63006 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx1P63006 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx1P63006 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx1P63006 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lhx1P63006 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Lhx1P63006 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx1P63006 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Lhx1P63006 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx1P63006 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.71■□□□□ 0.91
Lhx1P63006 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx1P63006 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lhx1P63006 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx1P63006 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.7■□□□□ 0.9
Lhx1P63006 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx1P63006 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx1P63006 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Lhx1P63006 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Lhx1P63006 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.69■□□□□ 0.9
Lhx1P63006 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.69■□□□□ 0.9
Lhx1P63006 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.69■□□□□ 0.9
Lhx1P63006 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx1P63006 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.69■□□□□ 0.9
Lhx1P63006 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Lhx1P63006 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx1P63006 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx1P63006 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Lhx1P63006 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx1P63006 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx1P63006 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lhx1P63006 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.68■□□□□ 0.9
Lhx1P63006 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx1P63006 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx1P63006 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx1P63006 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx1P63006 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx1P63006 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx1P63006 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.67■□□□□ 0.9
Lhx1P63006 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx1P63006 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx1P63006 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx1P63006 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx1P63006 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Lhx1P63006 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx1P63006 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx1P63006 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx1P63006 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lhx1P63006 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.65■□□□□ 0.9
Lhx1P63006 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx1P63006 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx1P63006 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lhx1P63006 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lhx1P63006 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lhx1P63006 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx1P63006 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
Lhx1P63006 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.64■□□□□ 0.89
Lhx1P63006 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx1P63006 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lhx1P63006 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lhx1P63006 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Lhx1P63006 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Lhx1P63006 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx1P63006 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx1P63006 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Lhx1P63006 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx1P63006 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx1P63006 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.62■□□□□ 0.89
Lhx1P63006 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx1P63006 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx1P63006 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lhx1P63006 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms