Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.3■□□□□ 0.84
Ythdf1P59326 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ythdf1P59326 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ythdf1P59326 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ythdf1P59326 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ythdf1P59326 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ythdf1P59326 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ythdf1P59326 Gm45855-201ENSMUST00000212546 880 ntBASIC20.29■□□□□ 0.84
Ythdf1P59326 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ythdf1P59326 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ythdf1P59326 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ythdf1P59326 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ythdf1P59326 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ythdf1P59326 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ythdf1P59326 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ythdf1P59326 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ythdf1P59326 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ythdf1P59326 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ythdf1P59326 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ythdf1P59326 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Ythdf1P59326 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ythdf1P59326 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ythdf1P59326 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ythdf1P59326 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ythdf1P59326 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ythdf1P59326 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ythdf1P59326 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ythdf1P59326 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ythdf1P59326 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ythdf1P59326 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.25■□□□□ 0.83
Ythdf1P59326 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.25■□□□□ 0.83
Ythdf1P59326 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ythdf1P59326 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ythdf1P59326 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ythdf1P59326 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ythdf1P59326 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ythdf1P59326 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ythdf1P59326 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ythdf1P59326 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ythdf1P59326 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.24■□□□□ 0.83
Ythdf1P59326 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ythdf1P59326 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ythdf1P59326 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ythdf1P59326 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ythdf1P59326 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Ythdf1P59326 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.23■□□□□ 0.83
Ythdf1P59326 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ythdf1P59326 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ythdf1P59326 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ythdf1P59326 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ythdf1P59326 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ythdf1P59326 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ythdf1P59326 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ythdf1P59326 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ythdf1P59326 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ythdf1P59326 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ythdf1P59326 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.22■□□□□ 0.83
Ythdf1P59326 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ythdf1P59326 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ythdf1P59326 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ythdf1P59326 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ythdf1P59326 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ythdf1P59326 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
Ythdf1P59326 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ythdf1P59326 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ythdf1P59326 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ythdf1P59326 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ythdf1P59326 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ythdf1P59326 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ythdf1P59326 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.2■□□□□ 0.82
Ythdf1P59326 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.2■□□□□ 0.82
Ythdf1P59326 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ythdf1P59326 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ythdf1P59326 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.2■□□□□ 0.82
Ythdf1P59326 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ythdf1P59326 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ythdf1P59326 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ythdf1P59326 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ythdf1P59326 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ythdf1P59326 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ythdf1P59326 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ythdf1P59326 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ythdf1P59326 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.19■□□□□ 0.82
Ythdf1P59326 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Ythdf1P59326 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.19■□□□□ 0.82
Ythdf1P59326 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
Ythdf1P59326 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ythdf1P59326 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ythdf1P59326 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ythdf1P59326 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms