Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PdgfbP31240 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PdgfbP31240 Gm7291-201ENSMUST00000199147 382 ntBASIC21.46■■□□□ 1.03
PdgfbP31240 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PdgfbP31240 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PdgfbP31240 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PdgfbP31240 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PdgfbP31240 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PdgfbP31240 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PdgfbP31240 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.45■■□□□ 1.02
PdgfbP31240 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PdgfbP31240 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PdgfbP31240 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PdgfbP31240 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PdgfbP31240 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PdgfbP31240 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PdgfbP31240 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.44■■□□□ 1.02
PdgfbP31240 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.44■■□□□ 1.02
PdgfbP31240 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PdgfbP31240 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.44■■□□□ 1.02
PdgfbP31240 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PdgfbP31240 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PdgfbP31240 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PdgfbP31240 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PdgfbP31240 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PdgfbP31240 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PdgfbP31240 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.43■■□□□ 1.02
PdgfbP31240 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PdgfbP31240 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PdgfbP31240 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PdgfbP31240 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.42■■□□□ 1.02
PdgfbP31240 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.42■■□□□ 1.02
PdgfbP31240 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.42■■□□□ 1.02
PdgfbP31240 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.42■■□□□ 1.02
PdgfbP31240 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PdgfbP31240 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PdgfbP31240 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PdgfbP31240 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PdgfbP31240 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.41■■□□□ 1.02
PdgfbP31240 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
PdgfbP31240 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.4■■□□□ 1.02
PdgfbP31240 Gm26571-201ENSMUST00000181399 666 ntBASIC21.4■■□□□ 1.02
PdgfbP31240 Gm43173-201ENSMUST00000202246 593 ntBASIC21.4■■□□□ 1.02
PdgfbP31240 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PdgfbP31240 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.39■■□□□ 1.02
PdgfbP31240 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PdgfbP31240 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PdgfbP31240 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PdgfbP31240 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PdgfbP31240 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.39■■□□□ 1.01
PdgfbP31240 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PdgfbP31240 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PdgfbP31240 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfbP31240 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PdgfbP31240 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfbP31240 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.38■■□□□ 1.01
PdgfbP31240 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.38■■□□□ 1.01
PdgfbP31240 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.38■■□□□ 1.01
PdgfbP31240 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PdgfbP31240 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfbP31240 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfbP31240 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfbP31240 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PdgfbP31240 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PdgfbP31240 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.37■■□□□ 1.01
PdgfbP31240 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.37■■□□□ 1.01
PdgfbP31240 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PdgfbP31240 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfbP31240 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfbP31240 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfbP31240 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PdgfbP31240 Gm12251-201ENSMUST00000117893 792 ntBASIC21.36■■□□□ 1.01
PdgfbP31240 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.36■■□□□ 1.01
PdgfbP31240 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PdgfbP31240 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PdgfbP31240 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PdgfbP31240 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PdgfbP31240 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PdgfbP31240 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.35■■□□□ 1.01
PdgfbP31240 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PdgfbP31240 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PdgfbP31240 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
PdgfbP31240 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfbP31240 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfbP31240 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfbP31240 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.34■■□□□ 1.01
PdgfbP31240 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.34■■□□□ 1.01
PdgfbP31240 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.34■■□□□ 1.01
PdgfbP31240 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PdgfbP31240 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PdgfbP31240 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.33■■□□□ 1
PdgfbP31240 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.32■■□□□ 1
PdgfbP31240 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PdgfbP31240 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.32■■□□□ 1
PdgfbP31240 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PdgfbP31240 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.32■■□□□ 1
PdgfbP31240 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.32■■□□□ 1
PdgfbP31240 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
PdgfbP31240 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PdgfbP31240 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms