Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msx1P13297 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Msx1P13297 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.88■□□□□ 0.77
Msx1P13297 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx1P13297 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx1P13297 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Msx1P13297 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.88■□□□□ 0.77
Msx1P13297 Gm40881-201ENSMUST00000223397 166 ntBASIC19.88■□□□□ 0.77
Msx1P13297 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.88■□□□□ 0.77
Msx1P13297 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx1P13297 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx1P13297 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx1P13297 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx1P13297 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msx1P13297 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Msx1P13297 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msx1P13297 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.87■□□□□ 0.77
Msx1P13297 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msx1P13297 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx1P13297 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx1P13297 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx1P13297 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.86■□□□□ 0.77
Msx1P13297 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx1P13297 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msx1P13297 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.86■□□□□ 0.77
Msx1P13297 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx1P13297 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx1P13297 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx1P13297 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Msx1P13297 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msx1P13297 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Msx1P13297 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msx1P13297 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.84■□□□□ 0.77
Msx1P13297 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msx1P13297 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.84■□□□□ 0.77
Msx1P13297 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msx1P13297 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.84■□□□□ 0.77
Msx1P13297 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msx1P13297 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Msx1P13297 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msx1P13297 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Msx1P13297 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Msx1P13297 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Msx1P13297 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.82■□□□□ 0.76
Msx1P13297 Gm12922-201ENSMUST00000120626 809 ntBASIC19.82■□□□□ 0.76
Msx1P13297 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.82■□□□□ 0.76
Msx1P13297 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.82■□□□□ 0.76
Msx1P13297 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Msx1P13297 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.82■□□□□ 0.76
Msx1P13297 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msx1P13297 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msx1P13297 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.81■□□□□ 0.76
Msx1P13297 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msx1P13297 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msx1P13297 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.81■□□□□ 0.76
Msx1P13297 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.81■□□□□ 0.76
Msx1P13297 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.8■□□□□ 0.76
Msx1P13297 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msx1P13297 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.8■□□□□ 0.76
Msx1P13297 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msx1P13297 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msx1P13297 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Msx1P13297 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Msx1P13297 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msx1P13297 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.79■□□□□ 0.76
Msx1P13297 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Msx1P13297 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.79■□□□□ 0.76
Msx1P13297 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.79■□□□□ 0.76
Msx1P13297 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.79■□□□□ 0.76
Msx1P13297 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msx1P13297 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msx1P13297 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msx1P13297 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
Msx1P13297 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Msx1P13297 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msx1P13297 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msx1P13297 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.78■□□□□ 0.76
Msx1P13297 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msx1P13297 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Msx1P13297 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Msx1P13297 Gm12821-201ENSMUST00000120022 600 ntBASIC19.77■□□□□ 0.76
Msx1P13297 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Msx1P13297 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Msx1P13297 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms