Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5640A3KG49 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm5640A3KG49 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5640A3KG49 Mir3960-201ENSMUST00000198213 73 ntBASIC21.28■■□□□ 1
Gm5640A3KG49 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm5640A3KG49 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5640A3KG49 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm5640A3KG49 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5640A3KG49 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Gm5640A3KG49 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5640A3KG49 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.27■■□□□ 1
Gm5640A3KG49 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.27■■□□□ 1
Gm5640A3KG49 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm5640A3KG49 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm5640A3KG49 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5640A3KG49 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5640A3KG49 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Gm5640A3KG49 Gm6821-201ENSMUST00000107540 542 ntBASIC21.26■□□□□ 0.99
Gm5640A3KG49 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5640A3KG49 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5640A3KG49 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5640A3KG49 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm5640A3KG49 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm5640A3KG49 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.24■□□□□ 0.99
Gm5640A3KG49 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5640A3KG49 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5640A3KG49 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5640A3KG49 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5640A3KG49 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5640A3KG49 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.24■□□□□ 0.99
Gm5640A3KG49 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm5640A3KG49 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5640A3KG49 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.23■□□□□ 0.99
Gm5640A3KG49 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5640A3KG49 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5640A3KG49 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Gm5640A3KG49 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5640A3KG49 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm5640A3KG49 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gm5640A3KG49 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5640A3KG49 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gm5640A3KG49 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5640A3KG49 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Gm5640A3KG49 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5640A3KG49 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5640A3KG49 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.22■□□□□ 0.99
Gm5640A3KG49 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5640A3KG49 Iqck-206ENSMUST00000208658 2891 ntBASIC21.22■□□□□ 0.99
Gm5640A3KG49 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.21■□□□□ 0.99
Gm5640A3KG49 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.21■□□□□ 0.99
Gm5640A3KG49 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.21■□□□□ 0.99
Gm5640A3KG49 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm5640A3KG49 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.2■□□□□ 0.99
Gm5640A3KG49 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Gm8503-201ENSMUST00000118131 455 ntBASIC21.2■□□□□ 0.98
Gm5640A3KG49 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5640A3KG49 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5640A3KG49 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Gm5640A3KG49 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5640A3KG49 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Gm5640A3KG49 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5640A3KG49 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5640A3KG49 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5640A3KG49 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5640A3KG49 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5640A3KG49 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm5640A3KG49 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5640A3KG49 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.18■□□□□ 0.98
Gm5640A3KG49 Gm45364-201ENSMUST00000210883 159 ntBASIC21.18■□□□□ 0.98
Gm5640A3KG49 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5640A3KG49 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Gm5640A3KG49 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5640A3KG49 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms