Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.23■□□□□ 0.19
Trbv3A0A0A6YYE2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv3A0A0A6YYE2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.22■□□□□ 0.19
Trbv3A0A0A6YYE2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv3A0A0A6YYE2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trbv3A0A0A6YYE2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.21■□□□□ 0.18
Trbv3A0A0A6YYE2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Trbv3A0A0A6YYE2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trbv3A0A0A6YYE2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv3A0A0A6YYE2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv3A0A0A6YYE2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv3A0A0A6YYE2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv3A0A0A6YYE2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv3A0A0A6YYE2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv3A0A0A6YYE2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trbv3A0A0A6YYE2 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.17■□□□□ 0.18
Trbv3A0A0A6YYE2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv3A0A0A6YYE2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv3A0A0A6YYE2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv3A0A0A6YYE2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv3A0A0A6YYE2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv3A0A0A6YYE2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv3A0A0A6YYE2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbv3A0A0A6YYE2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv3A0A0A6YYE2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv3A0A0A6YYE2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Mir3960-201ENSMUST00000198213 73 ntBASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Golph3-202ENSMUST00000226517 2359 ntBASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv3A0A0A6YYE2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms