Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-4A0A075B654 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-4A0A075B654 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav3-4A0A075B654 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav3-4A0A075B654 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav3-4A0A075B654 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav3-4A0A075B654 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-4A0A075B654 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-4A0A075B654 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav3-4A0A075B654 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-4A0A075B654 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.08□□□□□ -0.16
Trav3-4A0A075B654 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav3-4A0A075B654 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav3-4A0A075B654 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav3-4A0A075B654 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav3-4A0A075B654 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav3-4A0A075B654 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav3-4A0A075B654 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Gm22567-201ENSMUST00000175542 342 ntBASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav3-4A0A075B654 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms