Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm5866-201ENSMUST00000177881 973 ntBASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb3S4R1G7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Gm38671-201ENSMUST00000200573 130 ntBASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Gm45668-201ENSMUST00000211271 493 ntBASIC11.44□□□□□ -0.58
H2afb3S4R1G7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.44□□□□□ -0.58
H2afb3S4R1G7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Gm2423-201ENSMUST00000074863 733 ntBASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb3S4R1G7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Gm13813-201ENSMUST00000120998 787 ntBASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Gm28693-202ENSMUST00000190758 331 ntBASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
H2afb3S4R1G7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H2afb3S4R1G7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms