Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf3Q9QXK7 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm13875-201ENSMUST00000120162 282 ntBASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm45865-201ENSMUST00000211815 945 ntBASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf3Q9QXK7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm13342-201ENSMUST00000121055 207 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm2991-201ENSMUST00000173338 480 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Olfr582-201ENSMUST00000098212 960 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cpsf3Q9QXK7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms