Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Mir1897-201ENSMUST00000122581 272 ntBASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Shd-206ENSMUST00000225145 998 ntBASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ube4bQ9ES00 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.46
Ube4bQ9ES00 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.21□□□□□ -0.46
Ube4bQ9ES00 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.21□□□□□ -0.46
Ube4bQ9ES00 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm15460-201ENSMUST00000118147 391 ntBASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm25948-201ENSMUST00000175334 112 ntBASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gm9229-201ENSMUST00000222777 126 ntBASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ube4bQ9ES00 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.19□□□□□ -0.46
Ube4bQ9ES00 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube4bQ9ES00 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.18□□□□□ -0.46
Ube4bQ9ES00 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms