Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.77□□□□□ -0.2
Trim54Q9ERP3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim54Q9ERP3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim54Q9ERP3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim54Q9ERP3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Gm14017-201ENSMUST00000121934 386 ntBASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Gm24990-201ENSMUST00000157406 323 ntBASIC13.77□□□□□ -0.21
Trim54Q9ERP3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 AA914427-201ENSMUST00000193194 1166 ntBASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.77□□□□□ -0.21
Trim54Q9ERP3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim54Q9ERP3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm13570-201ENSMUST00000140763 309 ntBASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm27046-201ENSMUST00000182160 463 ntBASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim54Q9ERP3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Gm2260-201ENSMUST00000184965 657 ntBASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Gm3096-201ENSMUST00000185770 364 ntBASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Rps4l-202ENSMUST00000204242 789 ntBASIC13.75□□□□□ -0.21
Trim54Q9ERP3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms