Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.69■□□□□ 0.26
U2af1Q9D883 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.69■□□□□ 0.26
U2af1Q9D883 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.69■□□□□ 0.26
U2af1Q9D883 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.69■□□□□ 0.26
U2af1Q9D883 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
U2af1Q9D883 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
U2af1Q9D883 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
U2af1Q9D883 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
U2af1Q9D883 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Gm25214-201ENSMUST00000104573 129 ntBASIC16.68■□□□□ 0.26
U2af1Q9D883 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
U2af1Q9D883 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Gm12058-201ENSMUST00000118614 437 ntBASIC16.68■□□□□ 0.26
U2af1Q9D883 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.68■□□□□ 0.26
U2af1Q9D883 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.68■□□□□ 0.26
U2af1Q9D883 Gm21769-201ENSMUST00000211922 111 ntBASIC16.68■□□□□ 0.26
U2af1Q9D883 Gm30285-201ENSMUST00000214614 422 ntBASIC16.68■□□□□ 0.26
U2af1Q9D883 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
U2af1Q9D883 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
U2af1Q9D883 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Gm24255-201ENSMUST00000104481 128 ntBASIC16.67■□□□□ 0.26
U2af1Q9D883 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.67■□□□□ 0.26
U2af1Q9D883 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.67■□□□□ 0.26
U2af1Q9D883 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.67■□□□□ 0.26
U2af1Q9D883 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.67■□□□□ 0.26
U2af1Q9D883 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.67■□□□□ 0.26
U2af1Q9D883 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
U2af1Q9D883 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
U2af1Q9D883 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.66■□□□□ 0.26
U2af1Q9D883 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
U2af1Q9D883 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.66■□□□□ 0.26
U2af1Q9D883 Gm11222-201ENSMUST00000119005 738 ntBASIC16.66■□□□□ 0.26
U2af1Q9D883 Gm15703-201ENSMUST00000120250 880 ntBASIC16.66■□□□□ 0.26
U2af1Q9D883 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.66■□□□□ 0.26
U2af1Q9D883 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Gm37259-201ENSMUST00000193903 849 ntBASIC16.66■□□□□ 0.26
U2af1Q9D883 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.66■□□□□ 0.26
U2af1Q9D883 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
U2af1Q9D883 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
U2af1Q9D883 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC16.66■□□□□ 0.26
U2af1Q9D883 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.66■□□□□ 0.26
U2af1Q9D883 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.66■□□□□ 0.26
U2af1Q9D883 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
U2af1Q9D883 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms