Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Mms19Q9D071 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.62□□□□□ -0.23
Mms19Q9D071 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Mms19Q9D071 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.62□□□□□ -0.23
Mms19Q9D071 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Mms19Q9D071 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Mms19Q9D071 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.61□□□□□ -0.23
Mms19Q9D071 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Mms19Q9D071 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mms19Q9D071 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mms19Q9D071 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Mms19Q9D071 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Mms19Q9D071 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.6□□□□□ -0.23
Mms19Q9D071 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Mms19Q9D071 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.6□□□□□ -0.23
Mms19Q9D071 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.6□□□□□ -0.23
Mms19Q9D071 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.6□□□□□ -0.23
Mms19Q9D071 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.6□□□□□ -0.23
Mms19Q9D071 Gm3890-201ENSMUST00000182416 207 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Mms19Q9D071 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.6□□□□□ -0.23
Mms19Q9D071 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Mir339-201ENSMUST00000083659 96 ntBASIC13.6□□□□□ -0.23
Mms19Q9D071 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mms19Q9D071 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms