Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.76□□□□□ -0.53
Trim13Q9CYB0 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim13Q9CYB0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm9522-201ENSMUST00000182394 926 ntBASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm5279-201ENSMUST00000199575 745 ntBASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim13Q9CYB0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim13Q9CYB0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms