Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Daam2-202ENSMUST00000224595 1926 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm12241-201ENSMUST00000118330 726 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm4986-201ENSMUST00000119731 549 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm13297-201ENSMUST00000120205 934 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm7584-201ENSMUST00000175829 940 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm45865-201ENSMUST00000211815 945 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm7046-201ENSMUST00000221351 977 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 AC125539.1-202ENSMUST00000226449 670 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otud1Q9CUB6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm42919-201ENSMUST00000197753 1284 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm43758-201ENSMUST00000199500 367 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm43435-201ENSMUST00000199996 1438 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm45166-201ENSMUST00000209073 683 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm24526-201ENSMUST00000082921 158 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otud1Q9CUB6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms