Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.23□□□□□ -0.13
Smc1aQ9CU62 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Gm43822-201ENSMUST00000200285 476 ntBASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc1aQ9CU62 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.22□□□□□ -0.13
Smc1aQ9CU62 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc1aQ9CU62 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Gm10268-201ENSMUST00000085340 555 ntBASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smc1aQ9CU62 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms