Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Mir686-201ENSMUST00000102174 109 ntBASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Gm15376-201ENSMUST00000122258 783 ntBASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Gm38294-201ENSMUST00000192831 381 ntBASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Gm7775-201ENSMUST00000218871 853 ntBASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.46□□□□□ -0.57
Krt88Q9CPR6 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Krt88Q9CPR6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Krt88Q9CPR6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Krt88Q9CPR6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Gm11978-201ENSMUST00000122315 466 ntBASIC11.44□□□□□ -0.58
Krt88Q9CPR6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Gm27390-201ENSMUST00000184516 176 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms