Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm13123-201ENSMUST00000122173 492 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Gm27701-201ENSMUST00000184498 110 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Gm38671-201ENSMUST00000200573 130 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdk5rap3Q99LM2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gm8805-201ENSMUST00000117848 313 ntBASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gm14921-201ENSMUST00000118643 908 ntBASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gm14704-201ENSMUST00000120300 874 ntBASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gm8598-201ENSMUST00000221184 836 ntBASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdk5rap3Q99LM2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdk5rap3Q99LM2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gm9630-201ENSMUST00000178304 885 ntBASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gm28911-201ENSMUST00000188837 117 ntBASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdk5rap3Q99LM2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms