Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.58□□□□□ -0.4
Vsx1Q91V10 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Gm8285-201ENSMUST00000208293 759 ntBASIC12.57□□□□□ -0.4
Vsx1Q91V10 Gm44551-201ENSMUST00000208804 171 ntBASIC12.57□□□□□ -0.4
Vsx1Q91V10 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vsx1Q91V10 Daam2-202ENSMUST00000224595 1926 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm14704-201ENSMUST00000120300 874 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm19459-201ENSMUST00000176240 835 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm43058-201ENSMUST00000197645 625 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm7848-201ENSMUST00000210739 718 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms