Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Gm12490-201ENSMUST00000120255 560 ntBASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Gm14704-201ENSMUST00000120300 874 ntBASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Gm15806-201ENSMUST00000120696 955 ntBASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Gm27486-201ENSMUST00000184923 80 ntBASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.71
H1fooQ8VIK3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.71
H1fooQ8VIK3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
H1fooQ8VIK3 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.65□□□□□ -0.71
H1fooQ8VIK3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.65□□□□□ -0.71
H1fooQ8VIK3 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.65□□□□□ -0.71
H1fooQ8VIK3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm2231-201ENSMUST00000125661 612 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm8652-201ENSMUST00000181363 964 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm37497-201ENSMUST00000195830 798 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Mir339-201ENSMUST00000083659 96 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H1fooQ8VIK3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms