Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm23363-201ENSMUST00000175024 79 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Gm27701-201ENSMUST00000184498 110 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Gm8463-201ENSMUST00000208573 613 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim60Q8VI40 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.13□□□□□ -0.31
Trim60Q8VI40 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim60Q8VI40 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Gm8213-201ENSMUST00000118191 441 ntBASIC13.12□□□□□ -0.31
Trim60Q8VI40 Gm14704-201ENSMUST00000120300 874 ntBASIC13.12□□□□□ -0.31
Trim60Q8VI40 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.12□□□□□ -0.31
Trim60Q8VI40 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.12□□□□□ -0.31
Trim60Q8VI40 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim60Q8VI40 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Gm11637-201ENSMUST00000120601 592 ntBASIC13.11□□□□□ -0.31
Trim60Q8VI40 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Gm5866-201ENSMUST00000177881 973 ntBASIC13.11□□□□□ -0.31
Trim60Q8VI40 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Gm37922-201ENSMUST00000195596 455 ntBASIC13.11□□□□□ -0.31
Trim60Q8VI40 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.11□□□□□ -0.31
Trim60Q8VI40 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.11□□□□□ -0.31
Trim60Q8VI40 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.11□□□□□ -0.31
Trim60Q8VI40 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.11□□□□□ -0.31
Trim60Q8VI40 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim60Q8VI40 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim60Q8VI40 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trim60Q8VI40 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.1□□□□□ -0.31
Trim60Q8VI40 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms