Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Gm12363-201ENSMUST00000122250 668 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Gm17208-201ENSMUST00000168388 535 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 AY702102-202ENSMUST00000194651 1173 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Snora73a-201ENSMUST00000082453 205 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rfwd3Q8CIK8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Snord83b-201ENSMUST00000104546 94 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Gm27514-201ENSMUST00000183692 110 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.96□□□□□ -0.49
Rfwd3Q8CIK8 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms