Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gm11978-201ENSMUST00000122315 466 ntBASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gm21854-201ENSMUST00000179901 471 ntBASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gm9522-201ENSMUST00000182394 926 ntBASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gm8227-201ENSMUST00000223306 571 ntBASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc28bQ8CEG5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28bQ8CEG5 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28bQ8CEG5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28bQ8CEG5 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc28bQ8CEG5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28bQ8CEG5 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28bQ8CEG5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc28bQ8CEG5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms