Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm27839-201ENSMUST00000184242 106 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.65□□□□□ -0.22
Vcpip1Q8CDG3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm10012-201ENSMUST00000078252 192 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vcpip1Q8CDG3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.63□□□□□ -0.23
Vcpip1Q8CDG3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms